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Koreans only variants

T0 my regret, though it is not revealing at all in present population genetics, i conjecture that DNA of Koreans creates the mentality of Koreans whose feature are lies, scam and rage. While the mechanisms underlying human mentality has not been elucidated, at least i infer that DNA plays a pivotal role to mentality of humans.

Example of Koreans mentality (=lies and scam)

red uniform=Koreans, blue uniform=The Japanese. 2021/3/25 international friendship match Japan vs. Korea.

Koreans players are obviously intentionally hitting Japanese players, but Koreans players are trying to deceive with a caring gesture. And, Japanese people were deceived by a lie and scam that my arm accidentally hit him, despite the Japanese player's broken tooth.

Example2 of Koreans male mentality



Please strongly keep in your mind that the cited contents aren't wartime but peacetime !
As the natural result, buying a house in South Korea means buying a condominium for preventing "family destroying" such as the above.

Seoul, Korea. All buildings are condominiums, not commercial buildings.


Human personality (i.e., temperament and character) is a complex trait related to mental health, influenced by genetic and environmental factors. Despite the efforts performed during the past decades, its genetic background is only just beginning to be identified.

The personality of Koreans features instability in emotion, impulsivity in behavior, uncontrollable rage and lie just like breathing for the scam, and We The Japanese Instinctively know that Koreans are extreme wicked ethnic groups, even compared with The Chinese. What can you come into your mind except for DNA inherent to Koreans ? Because of the unique DNA, Koreans are very wicked as if like demons, That is the main insistence of this web site. Moreover, my investigation concludes that the overwhelming majority of variants inherent to Koreana deeply and functionally relates all kinds of human mentality, especially mental disorder and personality disorder, and that is the main insistence of this webpage.

Judging from the clear data Fact_1, Koreans may be "insane". But ridicule aside, the below list is a part of SNV-1 list, which inherent to Koreans by the following population genetics paper.

Whole genome sequencing of 35 individuals provides insights into the genetic architecture of Korean population
Wenqian Zhang et al.
Published: 21 October 2014 in BMC Bioinformatics
additional_file_7 xlsx

SNV=single nucleotide variant

Abbreviations in the above paper is as follows.
 
KPGP=Korean Personal Genomes Project
1KGP=1000 Genome Project
SNV-1=SNVs detected in at least one of the 35 Korean individuals but not included in either HapMap or 1KGP
SNV-35=SNVs detected in all of 35 Korean individuals but not included in either HapMap or 1KGP
SNV-1/ns= non-synonymous SNV from SNV-1
SNV-35/ns=non-synonymous SNV from SNV-35

Please keep in your mind that the above paper was written by FDA(U.S. Food and Drug Administration) in fact, denying the fact in formal.

The above paper didn't submit to Nature or Science etc famous journal of science, but this paper was presented at a academic conference held in Oakland, USA in March 2014.

Authors of the above paper are as follows, and all authors, except Heng Luo was researcher or programming engineer in FDA.
(When the above paper released, Heng Luo was a graduate student at the University of Arkansas, but researcher in FDA at present)

Wenqian Zhang(FDA)
Joe Meehan(FDA, Ph.D.)
Zhenqiang Su(FDA)
Hui Wen Ng(FDA)
Mao Shu(FDA)
Heng Luo(graduate student )
Weigong Ge(FDA)
Roger Perkins
Weida Tong(FDA, Ph.D.)
Huixiao Hong(FDA, Ph.D.)

[cited from the above population genetics paper]
The content is solely the responsibility of the authors and does not necessarily represent the official views of the Food and Drugs Administration, the National Center for Research Resources or the National Institutes of Health.

Disclosure
The findings and conclusions in this article have not been formally disseminated by the US Food and Drug Administration (FDA) and should not be construed to represent the FDA determination or policy.

Declarations
Publication costs of this article were funded by the US government.



Abbreviations

SNV-1= SNVs detected in at least one of the 35 Korean individuals but not included in either HapMap or 1KGP
SNV-1/ns=non-synonymous SNV from SNV-1
SCZ=schizophrenia,
ASD=Autism spectrum disorder,
ADHD=attention-deficit hyperactivity disorder
BPD= bipolar disorder,
MDD=major depressive disorder,
OCD=Obsessive-compulsive disorder,
Alz=Alzheimer,





1. Please don't misunderstand that the list below is all correct, because other papers may shows another or opposite result. In the event that you know the paper which deny the results, please inform me

2. Please ponder the list below which indicate anomalous results, and if you are Koreans and have a quibble of the list below, inform me with evidence or papers name without slander. To my regret, genetics papers below show "insane Koreans".
>
gene name SNV-1 SNV-1/ns Mental disorders
PRIM2
prostate

5033 10 insomia
paper[86]

SCZ
paper[103]
CSMD1

Brain
testis

1786 1 SCZ
paper[9]
paper[52]
paper[115]
paper[116]
paper[141]
paper[142]

BPD
paper[66]
paper[116]

ASD
paper[137]

cognitive ability
paper[138]

Memory/learning ability
paper[140]
snoU13
=snoRNA
1731 1 MDD,
insomia?
paper[43]
snoU13
Discovered in 1989

PDE4DIP
27623
17

heart
Brain

1374 14 mental disease
paper[4]

dementia,Alz, MDD
paper[119]

MDD,
paper[91]
RBFOX1
10121
16

Brain
heart
1272 0 anger
aggression towards others,
ASD
paper[100]

SCZ,
mental function
paper[5]

AlzMDD
paper[120]

MDD,SCZ
alcohol abuse
paper[121]

Personality,
paper[122]

ADHD
paper[123]

aggressive behavior
paper[124]

SCZ
(the neuron-specific RNA splicing regulator)
paper[125]
PTPRN2

Brain
stomach
1224 2 intermittent explosion disorder
paper[99]

MDD
paper[6]

SCZ
ADHD
paper[126]
KMT2C
20114
59

7q36.1
NCBI


1091 3 BPD
paper[7]

SCZ
paper[128]
 
MDD
paper[129]

BPD
paper[130]
PTPRD

Brain
kidney
1084 1 OCD
paper[8]

SCZ
synaptic adhesion
paper[125]

synaptic adhesion
AlzMDD
dementia
ID
anxiety disorder
OCD
paper[127]

ASD
paper[137]

OCD
paper[143]
LINC00842
skin
1008 1 0
CNTNAP2
16383
24

Brain
prostate
940 2 ID
ASD
paper[109]

SCZ
paper[10]

mental disorder
SCZ
ASD
paper[131]
ROBO2

Brain
lung
932 1SCZ
MDD
paper [13]

ASD
paper [117]
ZNF717

859 28 ID
paper[14]

mental disorder
 paper[93]

Brain
paper[94]

ASD
paper[132]
CROCC
844 5 0meaningless
AF146191
800 2 insomia
paper[101]
LSAMP
Brain
prostate
800 0 suicidal tendencies
paper[15]
WWOX
thyroid
Brain
797 0 ID
paper[81]
DLG2
Brain
789 0 SCZ
paper[5]
GUSBP1
testis
760 1 0meaningless
EYS
obesity
759 2 SCZ
paper[5]
ANKRD30BL
testis
730 3 0meaningless
MACROD2
lung
Brain
693 2 BPD
paper[5]
DPP6
Brain
endometrium
681 0 mental disorder
paper[89]
LRP1B
Brain
thyroid
677 2 cognitive ability
paper[5]
TPTE
testis
664 9 MDDリスク
paper[110]
ANKRD36C
653 23 AlzMDD
paper[112]
PCDH15
Brain
adrenal gland
645 5 cognitive ability
paper[114]

SCZ,
ASD
paper[82]
FHIT
642 0 SCZ
paper[5]
LINC00969
640 6 SCZ
paper[57]
KCNJ12
heart
Brain
626 16 MDD
paper[113]

Smith-Maginis syndrome
paper[58]
BAGE2
testis
618 3 0meaningless
UPK3B
lung
608 1 0meaningless
CTNNA3
heart
Brain
605 0 ASD
paper[79]

Response to antidepressants
paper[98]
NRXN3
Brain
602 1 mental disorder
paper[80]
ASD
paper[117]
CDH13

endometrium
Brain
600 0 ASD
SCZ,
BPD,
MDD,
ADHD
paper[16],paper[64]
SGCZ
ovary
Brain
582 0 MDD
paper[73]
CNTN5
placenta
thyroid
Brain
568 2 suicidal tendencies
paper[74]
PARK2
heart
kidney
Brain
568 1 ID
ASD
paper[109]

Personality
paper[75]
MAP2K3
564 5 mental disorder
paper[76]
CCSER1
564 2 alcohol abusealcohol abuse
paper[77]
GRID2
testis
Brain
561 1 心的ストレス
paper[78]
CTNNA2
Brain
553 0 教育との関連性
paper[5]
DAB1
intestinum tenue
duodenum
Brain
528 0 ID
paper[44]
GPC5
Brain
testis
527 1 congnitive ability
paper[45]
NAALADL2
519 0 ASD
paper[46]
MAGI2
Brain
506 1 SCZ,
MDD
[paper[47]

Personality
[paper[75]

SCZ
synaptic adhesion
paper[125]
DPP10
Brain
505 0 ADHD
paper[48]
PDE4D
503 14 OCD
paper[49]
KCNIP4
Brain
497 0 Personality disorder,
ADHD
paper[50]
CNTN4
485 1 ID
ASD
paper[109]

SCZ
paper[40]
paper[146]

ASD
paper[137]
TBC1D5
478 0 paper[51]
BPD
AGBL4
Brain
474 2 paper[52]
cogntive ability
ASIC2
Brain
endometrium
471 0 paper[52]
SCZ
CADM2
Brain
471 1 IQ
rs17518584
paper[118]
cognitive ability
paper[88]
CDH12
Brain
adrenal gland
469 0 SCZ,
BPD,
MDD
paper[24]
ZDHHC11
468 4 0meaningless
ADARB2
Brain
468 0 ASDpaper[53]
DCC
testis
Brain
467 2 cognitive ability
paper[5]

ADHD,MDD
paper[134]
intelligence
paper[135]

MDD
paper[136],paper[137]
GALNTL6
Brain
testis
459 0 0meaningless
ANKRD36
Brain
testis
458 23 alcohol abusealcohol abuse
paper[54]
CDH4
spleen
Brain
457 0 SCZ
paper[25]
PRR4
salivary gland
457 1 SCZ
paper[55]
LRRC4C
Brain
448 0 anorexia
paper[5]

SCZ
synaptic adhesion
paper[125]
MIR4435-1HG
445 0 0meaningless
LINC00960
443 4 SCZ
paper[56]
SLC9B1P4
442 1 0
PTPRT
Brain
434 0 ID
paper[58]
SDK1
431 2 child abuse
paper[59]
PARD3B
430 2 Personality disorder
paper[60]
SLC9B1P1
425 16 0meaningless
TAS2R14
421 0 0meaningless
RUNX1
420 2 ID
paper[61]
AUTS2

420 0 ID
ASD
paper[111]
メモはこのページ

SCZ,
ASD
paper
[42],[53]
CSMD3
Brain
testis
418 1 ASD
paper[62]
NRXN1
Brain
418 1 ID
ASD
paper[109]

ASD
SCZ
paper[35], paper[95]

ASD
paper[117]

SCZ
synaptic adhesion
paper[125]

Mental disorder
SCZ
ASD
paper[131]
LINC00955
duodenum
418 7 0meaningless
ZNF385D
testis・Brain
418 0 SCZ
paper[63]
PRKG1
417 0 ADHD
paper[64]
CAMTA1
Brain
416 0 memory ability
paper[65]
SPAG16
414 3 BPD
paper[66]
TMEM132D
Brain
410 0 panic disorder
paper[67]
ROBO1
409 1 Ability in mathematics
paper[68]
GPC6
408 0 ASD
paper[69] paper[137]
NBPF1
407 14 brain capacity
paper[92]
LRRTM4
Brain
406 1 Tourette's Syndrome
paper[70]
NOTCH2NL
405 2 brain capacity
ppaper[71]

ヒトのBrainの進化
paper[105]
NCOR1P2
402 1 0meaningless
TTC34
testis
400 3 0meaningless
NKAIN2
Brain
398 1 SCZ
paper[72]
SMYD3
397 0 ID
paper[41]
RPTOR
395 0 SCZ
paper[40]
AC090044.1
394 0 0meaningless
OPCML
Brain
390 2 SCZ
paper[37]
SNX29
390 0 Education
paper[5]

ASD
paper[26]
NRG1
388 0 ADHD
paper[2]

BPD
paper[104]

SCZ
paper[11]paper[87]

SCZ
synaptic plasticity-related genes
paper[125]
ERBB4
kidney
Brain
387 0 SCZ
paper[36]

ASD
paper[117]
ERC2
Brain
386 0 ASD,
SCZ
paper[35]

SCZ
ADHD
paper[126]
NTM
Brain
385 0 IQ
paper[34]

AlzMDD
paper[112]
SRGAP2B
383 0 Brain development
paper[83]
SLC9B1P3
383 3 0meaningless
CNTNAP3B
379 7 cognitive disability
paper[39]
Appendix 4
GRM7
Brain
379 2 BPD
paper[33]
CACNA2D3
Brain
adrenal gland
379 0 SCZ
paper[32]

SCZ
ion channel genes
paper[125]
MIR663A
376 0 0meaningless
SNTG1 376 0 AlzMDD
paper[84]
SUMF1
374 0 ID
paper[31]
SORCS2
Brain
373 4 BPD,
SCZ,
ADHD
paper[30]

AlzMDD
paper[112]
DMD
373 2 ASD
paper[117]
HYDIN
testis
372 2 brain capacity
paper[85]
DGKB
Brain
372 1 cognitive ability
paper[29]
NRG3
Brain
371 0 SCZ
paper[28]

SCZ
synaptic plasticity-related genes
paper[125]
FAM182B
Brain
Skin
369 13 0meaningless
TEKT4P2
368 0 0meaningless
DIP2C
367 2 mental disease
paper[27]
AGBL1
366 0 ASD
paper[26]
CDH18
Brain
364 0 SCZ,
BPD,
MDD
paper[24]
HERC2P3
364 0 ADHD
paper[23]
FRG2C
testis
363 24 ADHD
paper[23]
TRPM3
kidney
359 0 ID
paper[22]
TRAPPC9
358 0 ID
paper[21]

ID
paper[133]
ERICH1-AS1
Brain
357 0 SCZ
paper[5]
DLGAP1
Brain
355 0 SCZ
paper[20]
HDAC9
354 0 SCZ
paper[19]
CTNND2
Brain
354 1 ID
paper[18]
SHANK2
Brain
kidney
322 2 ID,
ASD
paper[109]
EXOC4
320 1 intelligence
paper[135]
DPYD
319 0 borderline personality disorder
paper[97]

ASD
paper[117]
PCDH9
Brain
330 0 ID,
ASD
paper[109]
SHANK2
Brain
kidney
322 2 ID,
ASD
paper[109]

MDD
paper[129]
NEGR1
Brain
312 1 intelligence
paper[135]
CACNA1C
302 1 SCZ
paper[95]
paper[141]
paper[146]

Alz,MDD
paper[112]


KIRREL3
Brain
245 0 ID
ASD
paper[109]
FOXP1
244 0 ID
paper[108]
AFF3
265 0 ID
paper[106]

ID
paper[107]
ARHGAP15
lymph
bone marrow
231 0 intelligence
paper[135]
CACNA1B
Brain
220 1 SNV-35=26
SCZ
paper[96]
SCAPER
176   ID
paper[133]
TRIO
169 0 ID
paper[108]
OR4C3
163 8 MDD
paper[134]
OR4C5
981
155 21 SCZ
ppaper[90]

ADHD,MDD
paper[134]
ARID1B
146 0 ID
paper[108]
MED13L
119 0 ID
paper[108]
DYSF
110 2 intelligence
SNV-35が1
paper[135]

1.it is beyond all doubts that a great majority of SNV-1 over 350 have relation to mental deseases, personality disorders and human personality, and in other words, Koreans are completely differs from to The Chinese and The Japanese in mental traits, despite of geographic proximity.

2.Needless to say, It is important not to forget that papers of genetic pathology include a lot of controversial and disputable results in many cases, So please remember the presumption that the results presented in the above papers are not necessarily correct. It is therefore essential that multiple papers indicate a genetic association between mental disease and gene.

3.Koreans have no winners of any of the 63 international famous science-related academic prizes, not to mention Nobel Prizes!, despite of high education revel ratio and large population size (detailed data is here), and this fact completely coincides with the above list.

PRIM2 and snoU13 gene

It is certain that insomnia which related to major depressive disorder spread over South Korea, and korean type's insomnia would be caused by PRIM2 and snoU13 gene.

South Korea: Why so many struggle to sleep from BBC
South Korea is one of the most sleep deprived nations on earth. It also has the highest suicide rate among developed nations, the highest consumption of hard liquor and a huge number of people on antidepressants.

In Seoul, whole department stores are devoted to sleep products, from the perfect sheets to the optimum pillow, while pharmacies offer shelves full of herbal sleep remedies and tonics. And then there are the tech approaches to insomnia.


CSMD1,CNTNAP2,OR4C5 and others

CSMD1 gene
# of SNVs in SNV-1=1786
# of nsSNVs in SNV-1=1
# of SNVs in SNV-35=1
# of SNVs in nsSNV-35=0

OR4C5 gene
# of SNVs in SNV-1=155
# of nsSNVs in SNV-1=21
# of SNVs in SNV-35=49
# of SNVs in nsSNV-35=11
from additional_file_7 xlsx

1.There are abundant evidence in the above papers, and there can be no dispute about the facts that Korean type schizophrenia is in Koreans. However, to my knowledge, there are no papers which indicate symptoms peculiar to Koreans of schizophrenia.

2.Please don't misunderstand that the prevalence rates of schizophrenia are high among Koreans compared with other ethnic populations, it is rather the opposite. Schizophrenia prevalence rates of Koreans are low as well as The Japanese and The Chinese compared with White and Blacks.

Characteristics of Korean-Americans With Schizophrenia: A Cross-Ethnic Comparison With African-Americans, Latinos, and Euro-Americans
Sung-Woo Bae and John S. Brekke
Schizophrenia Bulletin, Vol. 28, No. 4, 2002

[cited]
Data on 223 individuals diagnosed with schizophrenia who were Korean-American (« = 40), Euro-American (« = 95), African-American (n = 60), and Latino (n = 28) were gathered in face-to-face interviews. All of the subjects were engaged in outpatient treatment. After controlling for sociodemographic variables, the main findings were as follows: (1) while the Korean-Americans were the least acculturated, their symptom levels and clinical status were highly comparable with those of the other ethnic groups; (2) based on living situation, family contact, social functioning, activities of daily living, and vocational data, the Korean-Americans showed a stronger familial orientation, lower social initiation, and higher affiliative qualities than other groups; (3) the Korean-American sample had comparable levels of self-esteem but reported lower satisfaction with life than the other ethnic groups. Minority status did not confound these findings. It is concluded that the psychosocial profile of the Korean-Americans was strongly influenced by their traditional and collectivistic cultural orientation.


PDE4DIP and ZNF717 gene

These gene might be the crucial gene which determines the personality(i.e., temperament and character) of Koreans.

PDE4DIP gene
# of SNVs in SNV-1=1374
# of nsSNVs in SNV-1=138
# of SNVs in SNV-35=14
# of SNVs in nsSNV-35=3


ZNF717 gene
# of SNVs in SNV-1=856
# of nsSNVs in SNV-1=28
# of SNVs in SNV-35=3
# of SNVs in nsSNV-35=0
from additional_file_7 xlsx

Extensive genomic and transcriptional diversity identified through massively parallel DNA and RNA sequencing of eighteen Korean individuals
Young Seok Ju et al.
Nature Genetics VOLUME 43 | NUMBER 8 | AUGUST 2011

[cited]
A subset of the nsSNPs showed remarkably high allele frequencies among Koreans studied compared to other populations, including Europeans and west Africans represented in the HapMap project.



We found a subset of genes to be highly enriched for nsSNPs, here called super nsSNP genes (Supplementary Table 8 and Supplementary Note). For example, ZNF717 and CDC27 showed ~100 times increased density of nsSNPs compared to other genes (Table 2).

paper[4]
Association between SNPs and gene expression in multiple regions of the human brain
S Kim et al,
Nature Published: 08 May 2012

[cited]
We identified cis associations between 648 transcripts and 6725 SNPs in the various brain regions. Several SNPs showed brain regional-specific associations. The expression level of only one gene, PDE4DIP, was associated with a SNP, rs12124527, in all the brain regions tested here.

In this study, we conducted an eQTL analysis of 315 440 transcripts in 5 different brain regions from two different tissue collections and identified cis associations between 648 transcripts and 6725 SNPs. The expression of one gene, PDE4DIP, was associated with one SNP, rs12124527, in all brain regions examined.




Genome-wide association meta-analysis in 269,867 individuals identifies new genetic and functional links to intelligence
Jeanne E Savage et al.
Published online 2018 Nature genetics

To my knowledge, the above paper is the most comprehensive paper of genes related to intelligence and Supplementary Materials include a gene list of intelligence.

result of compared with the above paper and SNV-1(=Korean only variants)

compare.xlsx
ratio of SNV-1 in intelligence related gene list
compare2.xlsx
ratio of SNV-1/ns in intelligence related gene list
compare2.xlsx
validation of SNV-1 ratio

Surprisingly, almost all SNV-1 are associated with intelligence, concretely speaking, 496 genes(97.8%) of 507 genes associated with intelligence specified by the above paper are SNV-1.
(SNV-1=Korean only variants=SNVs detected in at least one of the 35 Korean individuals but not included in either HapMap or 1KGP)

The fact that there are no winners of all sixty-three international scientific prizes in South Korea and the above facts completely coincide, and Koreans are very unique or anomalous in intelligence. Maybe, you would think that intelligence of Koreans not at all different to intelligence of The Chinese and The Japanese. However, there is no doubt that genetics papers clearly indicate that Koreans are completely different to The Chinese and The Japanese in intelligence.

Why such a strange phenomena occur in spite of geographic proximity? As a matter of fact, bottleneck effect in the 13th century at Korean Peninsula occurred by Genghis Khan and the son's invasion.
I infer that the population of the Korean Peninsula declined by 85% to 90% in the 13th century.(Please read this article, using machine translation tools. Chinese researchers estimate that the population of neighboring Liaoning Province, China, also declined by 90% during the same period.)

Maybe, the following phrase shall spread over the world within next three decades.

You are insane like Koreans.





paper[1]
Rare coding variants in 10 genes confer substantial risk for schizophrenia.
Singh TJ et al.
Nature. April 6, 2022

paper[2]
an intriguing therapeutic target for neurodevelopmental disorders
Liang Shi & Clare M. Bergson
Nature Published: 16 June 2020

paper[3]
An interaction network of mental disorder proteins in neural stem cells
M J Moen et al,
Nature Published: 04 April 2017

paper[4]
Association between SNPs and gene expression in multiple regions of the human brain
S Kim et al,
Nature Published: 08 May 2012

paper[5]
Identification of pleiotropy at the gene level between psychiatric disorders and related traits
Tatiana Polushina et al,
Nature Published: 29 July 2021

[cited from the above paper]
Here, we aimed to identify genetic overlaps at the gene level between 7 mental disorders (schizophrenia, autism spectrum disorder, major depressive disorder, anorexia nervosa, ADHD, bipolar disorder and anxiety), 8 brain morphometric traits, 2 cognitive traits (educational attainment and general cognitive function) and 9 personality traits (subjective well-being, depressive symptoms, neuroticism, extraversion, openness to experience, agreeableness and conscientiousness, children’s aggressive behaviour, loneliness) based on publicly available GWASs.

paper[6]
A Genomewide Linkage Scan of Cocaine Dependence and Major Depressive Episode in Two Populations
Bao-Zhu Yang et ai.
Nature Published: 17 August 2011

paper[7]
Exome sequencing for bipolar disorder points to roles of de novo loss-of-function and protein-altering mutations
M Kataoka et al.
Nature Published: 24 May 2016

paper[8]
Genome-wide association study in obsessive-compulsive disorder: results from the OCGAS
M Mattheisen
Nature Published: 13 May 2014

paper[9]
The Schizophrenia-Associated Gene, CSMD1,Encodes a Brain-Specific Complement Inhibitor
Matthew L Baum
Harvard Libraly

paper[10]
CNTNAP2 gene dosage variation is associated with schizophrenia and epilepsy
J I Friedman et al.
Nature Published: 24 July 2007

paper[11]
The molecular genetics of schizophrenia: new findings promise new insights M J Owen et al.
Nature Published: 28 October 2003

paper[12]
A genome-wide investigation into parent-of-origin effects in autism spectrum disorder identifies previously associated genes including SHANK3
Siobhan Connolly et al.
Nature Published: 23 November 2016


paper[13]
Convergence of evidence from a methylome-wide CpG-SNP association study and GWAS of major depressive disorder
Karolina A. Aberg et al.
Nature Published: 22 August 2018

[cited from the above paper]
ROBO2 (roundabout, axon guidance receptor, homolog 2) is critical for the maintenance of inhibitory synapses in the adult ventral tegmental area, a brain region important for the production of dopamine[41], and has been implicated in schizophrenia[42],[43],[44] and bipolar depression[45].

paper[14]
Identification of 11 potentially relevant gene mutations involved in growth retardation, intellectual disability, joint contracture, and hepatopathy
Hongyan Diao et al.
Published online 2018 Nov 16

paper[15]
Association of limbic system-associated membrane protein (LSAMP) to male completed suicide
Anne Must et al.
Published: 23 April 2008

[cited from above paper]
According to the results of the current study, there might be a chance that variations in LSAMP gene play a role in pathoaetiology of suicidal behaviour.

paper[16]
The role of cadherin genes in five major psychiatric disorders: A literature update
Ziarih Hawi et al.
published: 18 September 2017

paper[17] Chromosome aberrations involving 10q22: report of three overlapping interstitial deletions and a balanced translocation disrupting C10orf11
Andreas Tzschach et al.
Nature Published: 21 October 2009

paper[18]
CTNND2— a candidate gene for reading problems and mild intellectual disability
Wolfgang Hofmeister et al.
February 3, 2015

paper[19]
HDAC9 is implicated in schizophrenia and expressed specifically in post-mitotic neurons but not in adult neural stem cells
Bing Lang et al.
Published online 2011 Aug 18.

paper[20]
Genetic analysis of the DLGAP1 gene as a candidate gene for schizophrenia
Jun-Ming Liet al
30 January 2013

paper[21]
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Asif Mir et al.
11 December 2009

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eLife 2020

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Erik A Ehli et al.
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Xing Chen et al.
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Aiden P. Corvin
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Genetic Basis of a Cognitive Complexity Metric
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[cited from the above paper] Abstract
Relational complexity (RC) is a metric reflecting capacity limitation in relational processing. It plays a crucial role in higher cognitive processes and is an endophenotype for several disorders. However, the genetic underpinnings of complex relational processing have not been investigated. Using the classical twin model, we estimated the heritability of RC and genetic overlap with intelligence (IQ), reasoning, and working memory in a twin and sibling sample aged 15-29 years (N = 787). Further, in an exploratory search for genetic loci contributing to RC, we examined associated genetic markers and genes in our Discovery sample and selected loci for replication in four independent samples (ALSPAC, LBC1936, NTR, NCNG), followed by meta-analysis (N>6500) at the single marker level. Twin modelling showed RC is highly heritable (67%), has considerable genetic overlap with IQ (59%), and is a major component of genetic covariation between reasoning and working memory (72%). At the molecular level, we found preliminary support for four single-marker loci (one in the gene DGKB), and at a gene-based level for the NPS gene, having influence on cognition. These results indicate that genetic sources influencing relational processing are a key component of the genetic architecture of broader cognitive abilities. Further, they suggest a genetic cascade, whereby genetic factors influencing capacity limitation in relational processing have a flow-on effect to more complex cognitive traits, including reasoning and working memory, and ultimately, IQ.

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Nicholas C. Stefanis
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OPCML Gene as a Schizophrenia Susceptibility Locus in Thai Population
Benjaporn Panichareon
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Julia Morris et al
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Naseer Pasha et al
February 17, 2021

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Daniel L. McCartney et al.
Nature Published: 19 March 2018

[cited from the above paper] Twenty-two of the DMRs identified were within the major histocompatibility complex (MHC; Fig. 3), which has been implicated in the pathogenesis of SZ through a large-scale GWAS.16 In addition, we identified DMRs within two additional genes (IGSF9B, CNTN4) that showed genome-wide association with SZ in the same study.
Two additional DMRs were identified within genes associated with SZ at the genome-wide significant level by the SZ Working Group of the Psychiatric Genomics Consortium (PGC).16 These were within the genes IGSF9B and CNTN4, both of which function as cell adhesion molecules. Two large-scale epigenome-wide association studies of SZ have recently been reported.12,13 These studies reported significant differential methylation in RPTOR: a gene in which we identified a DMR. RPTOR is a key component of mTOR signalling, which has been implicated in synaptic plasticity.36

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J Elia et al
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ThaisMartins-Silva
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Eleni Katzaki et al
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Michael Heide
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[cited from above paper] Suggestively significant findings in SNP-based tests for depressive temperament
In case of depressive temperament, genome-wide SNP-based tests yielded a genomic inflation factor of λ = 1.00172. For the QQ plot, see Supplementary Fig. S3. No SNP survived Bonferroni correction for multiple testing, but five SNPs showed a suggestive significance, one of which resides in the SGCZ gene, whereas the rest are intergenic (Fig. 2 I-C and Table 1).

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Rona J.Strawbridge
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Genetic Dissection of Temperament Personality Traits in Italian Isolates
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Majid Nikpay
Nature Published: 02 February 2012
[cited]
Links between substance use habits, obesity, stress and the related cardiovascular outcomes can be, in part, because of loci with pleiotropic effects. To investigate this hypothesis, we performed genome-wide mapping in 119 multigenerational families from a population in the Saguenay-Lac-St-Jean region with a known founder effect using 58 000 single-nucleotide polymorphisms and 437 microsatellite markers to identify genetic components of the following factors: habitual alcohol, tobacco and coffee use; response to mental and physical stress; obesity-related traits; and heart rate (HR) and blood pressure (BP) measures. Habitual alcohol and/or tobacco users had attenuated HR responses to mental stress compared with non-users, whereas hypertensive individuals had stronger HR and systolic BP responses to mental stress and a higher obesity index than normotensives. Genetic mappings uncovered numerous shared genes among substance use, stress response, obesity and hemodynamic traits, including CAMK4, CNTN4, DLG2, FHIT, GRID2, ITPR2, NOVA1 and PRKCE, forming network of interacting proteins, sharing synaptic function and display higher and patterned expression profiles in brain-related tissues; moreover, pathway analysis of shared genes pointed to long-term potentiation.

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Elena Bacchelli
Nature Published: 21 February 2020

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[cited from the above paper]
OR4C5 is a gene predicted by GDI to be highly damaging.

[notes]
# of SNVs in SNV-1/ns is 21.
"# of SNVs in SNV-35/ns" is 11.

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Chia-Hsiang Chen et.al
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Jasleen Dhaliwal et.al
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Whole-exome sequencing identifies variants associated with structural MRI markers in patients with bipolar disorders
Mi-Ryung Han et.al
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Severe Intellectual Disability Associated with Recessive Defects in CNTNAP2 and NRXN1
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Ekaterina A. Gibitova et.al
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Victoria Powell et.al
01 April 2021(Nature)

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Biological annotation of genetic loci associated with intelligence in a meta-analysis of 87 740 individuals
Jonathan R. I. Coleman et.al
2019 Aug 1

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Peilin Meng et.al
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Angélica Torres-Berrío et.al
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Genome-wide Association Study of Autism Spectrum Disorder in the East Asian Populations
Xiaoxi Liu et.al
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Genetic Variants in CSMD1 Gene Are Associated with Cognitive Performance in Normal Elderly Population
Vadim Stepanov et.al
12 December 2017

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Neuropsychological effects of the CSMD1genome-wide associated schizophrenia risk variantrs10503253
G. Donohoe et.al
20 December 2012

ただし,2016年の中国人による論文では,rs10503253置換変異とSCZの関係を否定している。P > 0.05と論文要旨で明言
サンプルは中国人のみである
No association between the rs10503253 polymorphism in the CSMD1 gene and schizophrenia in a Han Chinese population
Yansong Liu et.al
04 July 2016

paper[141]
Genome-Wide Supported Risk Variants in MIR137, CACNA1C, CSMD1, DRD2, and GRM3 Contribute to Schizophrenia Susceptibility in Pakistani Population
Ambrin Fatima et.al
2017 Sep 11
(中国人による論文では2016年にrs10503253とSCZの関係を否定しているが,1年後に出た上記論文では肯定している。サンプルはパキスタン人のみである。)

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The Complement Control-Related Genes CSMD1 and CSMD2 Associate to Schizophrenia
Bjarte Håvik et.al
1 July 2011

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Christie L. Burton et.al
02 February 2021

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Gene Size Matters: An Analysis of Gene Length in the Human Genome
Inês Lopes et.al
11 February 2021

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Brain and testis: more alike thanpreviously thought?
Bárbara Matos et.al
27 April 2021

paper[146]
Multi-ancestry eQTL meta-analysis of human brain identifies candidate causal variants for brain-related traits
Biao Zeng et.al
Nature Genetics 2022 Aug 1








The following points are scientific facts of Korean DNA, indecating the uniquness of genetic structure.
1. Unusual high ratio of nonsynonymous variants compared with other population.
2.Strange distribution of minor allele of frequency and of Korean only variants.